16S rDNA-based phylogeny of sulfur-oxidizing bacterial endosymbionts in marine bivalves from cold-seep habitats.

Imhoff, Johannes F. , Sahling, Heiko, Süling, Jörg and Kath, T. (2003) 16S rDNA-based phylogeny of sulfur-oxidizing bacterial endosymbionts in marine bivalves from cold-seep habitats. Open Access Marine Ecology Progress Series, 249 . pp. 39-51. DOI 10.3354/meps249039.

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Abstract

The phylogenetic relationship of sulphur-oxidising endosymbiotic bacteria from bivalves of the families Vesicomyidae (Calyptogena sp. C1, Calyptogena sp. C3), Solemyidae (Acharax sp.) and Thyasiridae (Conchocele sp.) from cold-seep habitats were determined by 16S rDNA nucleotide sequence analyses. The endosymbiotic bacteria form distinct groups within the gamma-Proteobacteria and are well separated from each other and from free-living sulphur-oxidising bacteria of the genera Beggiatoa, Halothiobacillus and Thiomicrospira. The endosymbiotic bacteria of Acharax sp. from cold seeps off Oregon, Indonesia and Pakistan have sequences highly similar to each other but quite distinct from other thiotrophic endosymbionts. This includes endosymbionts from Solemya spp., to which they are distantly related. Symbiotic bacteria of Conchocele sp. from a cold seep in the Sea of Okhotsk are similar to those of Bathymodiolus thermophilus and related species, as shown by their overall sequence similarity and by signature sequences. The endosymbiotic bacteria of Calyptogena spp. from cold seeps off Oregon and Pakistan are closely related to those of other vesicomyids. Endosymbiont species found off Oregon corresponded to 2 different clusters of Calyptogena spp. symbionts in the same samples. The results corroborate the hypothesis of a monophyletic origin of the symbionts in vesicomyid clams, and support the existence of deeply branching groups in solemyid symbionts and of divergent lines and distribution for thyasirid symbionts. The results also indicate that certain symbiont species cluster according to the depth distribution of their hosts, and that in consequence host species together with their symbionts may have undergone depth-specific adaptation and evolution.

Document Type: Article
Keywords: Endosymbiotic sulphur bacteria; Bacterial phylogeny; Cold seeps; Acharax; Conchocele; Calyptogena
Research affiliation: OceanRep > Geomar Research Center for Marine Geosciences
OceanRep > GEOMAR > FB3 Marine Ecology > FB3-MI Marine Microbiology
Refereed: Yes
Open Access Journal?: No
DOI etc.: 10.3354/meps249039
ISSN: 0171-8630
Date Deposited: 12 Sep 2008 15:05
Last Modified: 30 May 2018 10:46
URI: http://oceanrep.geomar.de/id/eprint/1069

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