Items where Author is "Kumar, Abhishek"

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Number of items: 29.

Articles in a Scientific Journal - peer-reviewed


Bandapalli, O. R., Paramasivam, N., Giangiobbe, S., Kumar, A., Benisch, W., Engert, A., Witzens-Harig, M., Schlesner, M., Hemminki, K. and Försti, A. (2018) Whole genome sequencing reveals DICER1 as a candidate predisposing gene in familial Hodgkin lymphoma. International Journal of Cancer, 143 (8). pp. 2076-2078. DOI 10.1002/ijc.31576.


Kumar, A., Bandapalli, O. R., Paramasivam, N., Giangiobbe, S., Diquigiovanni, C., Bonora, E., Eils, R., Schlesner, M., Hemminki, K. and Försti, A. (2018) Familial Cancer Variant Prioritization Pipeline version 2 (FCVPPv2) applied to a papillary thyroid cancer family. Scientific Reports, 8 (1). DOI 10.1038/s41598-018-29952-z.


Kumar, A., Cherukumilli, M., Mahmoudpour, S. H., Brand, K. and Bandapalli, O. R. (2018) ShRNA-mediated knock-down of CXCL8 inhibits tumor growth in colorectal liver metastasis. Biochemical and Biophysical Research Communications, 500 (3). pp. 731-737. DOI 10.1016/j.bbrc.2018.04.144.


Kumar, A., Sørensen, J. L., Hansen, F. T., Arvas, M., Syed, M. F., Hassan, L., Benz, J. P., Record, E., Henrissat, B., Pöggeler, S. and Kempken, F. (2018) Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters. Open Access Scientific Reports, 8 (1). DOI 10.1038/s41598-018-28473-z.


Sarde, S. J., Kempken, F. and Kumar, A. (2018) A survey of spliceosomal proteins encoded by fungal genomes. Current Science, 114 (8). pp. 1677-1686.


Sarde, S. J., Kumar, A., Remme, R. N. and Dicke, M. (2018) Genome-wide identification, classification and expression of lipoxygenase gene family in pepper. Plant Molecular Biology, 98 (4-5). pp. 375-387. DOI 10.1007/s11103-018-0785-y.


Schoville, S. D., Chen, Y. H., Andersson, M. N., Benoit, J. B., Bhandari, A., Bowsher, J. H., Brevik, K., Cappelle, K., Chen, M. J. M., Childers, A. K., Childers, C., Christiaens, O., Clements, J., Didion, E. M., Elpidina, E. N., Engsontia, P., Friedrich, M., García-Robles, I., Gibbs, R. A., Goswami, C., Grapputo, A., Gruden, K., Grynberg, M., Henrissat, B., Jennings, E. C., Jones, J. W., Kalsi, M., Khan, S. A., Kumar, A., Li, F., Lombard, V., Ma, X., Martynov, A., Miller, N. J., Mitchell, R. F., Munoz-Torres, M., Muszewska, A., Oppert, B., Palli, S. R., Panfilio, K. A., Pauchet, Y., Perkin, L. C., Petek, M., Poelchau, M. F., Record, É., Rinehart, J. P., Robertson, H. M., Rosendale, A. J., Ruiz-Arroyo, V. M., Smagghe, G., Szendrei, Z., Thomas, G. W. C., Torson, A. S., Vargas Jentzsch, I. M., Weirauch, M. T., Yates, A. D., Yocum, G. D., Yoon, J. S. and Richards, S. (2018) A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Scientific Reports, 8 (1). DOI 10.1038/s41598-018-20154-1.

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Kramer, A., Beck, H. C., Kumar, A., Kristensen, L. P., Imhoff, J. F. and Labes, A. (2015) Proteomic Analysis of Anti-Cancerous Scopularide Production by a Marine Microascus brevicaulis Strain and Its UV Mutant. Open Access PLoS ONE, 10 (10). e0140047. DOI 10.1371/journal.pone.0140047.


Kumar, A., Henrissat, B., Arvas, M., Syed, M. F., Thieme, N., Benz, J. P., Sorensen, J. L., Record, E., Poeggeler, S. and Kempken, F. (2015) De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster. Open Access Plos One, 10 (10).


Lukassen, M. B., Saei, W., Sondergaard, T. E., Tamminen, A., Kumar, A., Kempken, F., Wiebe, M. G. and Sorensen, J. L. (2015) Identification of the Scopularide Biosynthetic Gene Cluster in Scopulariopsis brevicaulis. Open Access Marine Drugs, 13 (7). pp. 4331-4343.


Grüttner, S., Hopf, C., Kumar, A. and Kempken, F. (2013) Deletions in cox2 mRNA Result in Loss of Splicing and RNA Editing and Gain of Novel RNA Editing Sites. Open Access PLoS ONE, 8 (12).


Kumar, A., Kollath-Leiss, K. and Kempken, F. (2013) Characterization of bud emergence 46 (BEM46) protein: Sequence, structural, phylogenetic and subcellular localization analyses. Biochemical and Biophysical Research Communications, 438 (3). pp. 526-532.


Traeger, S., Altegoer, F., Freitag, M., Gabaldon, T., Kempken, F., Kumar, A., Marcet-Houben, M., Poggeler, S., Stajich, J. E. and Nowrousian, M. (2013) The Genome and Development-Dependent Transcriptomes of Pyronema confluens: A Window into Fungal Evolution. PLoS Genetics, 9 (9).

Presentations


Kramer, A., Beck, H. C., Kumar, A., Labes, A. and Imhoff, J. F. (2014) Proteomic analysis of Scopulariopsis brevicaulis LF580 and its mutant strain M26 for the production of the cyclodepsipeptides scopularide A and B. [Talk] In: 4. Gemeinsame Jahrestagung der Deutschen Gesellschaft für Hygiene und Mikrobiologie (DGHM) e. V. zusammen mit der Vereinigung für Allgemeine und Angewandte Mikrobiologie (VAAM) e. V.. , 05.-08.10.2014, Dresden, Germany .


Kumar, A. (2012) Marine fungal isolates: genome sequence analysis using different next generation DNA sequencing methods to find potential cancer drugs. [Talk] In: 60 Jahre Deutsch - Indische Zusammenarbeit. , 14.09.2012, Berlin, Germany .

Conference posters

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Kramer, A., Beck, H. C. and Kumar, A. (2014) Quantitative proteomics of the regulation patterns in scopularide A and B production by a marine Scopulariopsis brevicaulis strain LF580. [Poster] In: ELRIG 2014 Research and Innovation - Impact into Cancer. , 11.03.2014, Telford, UK .


Kumar, A. and Kempken, F. (2014) Genome sequencing, assembly and annotation of a marine fungal isolate of Scopulariopsis brevicaulis using three different next generation sequencing technologies. [Poster] In: ELRIG 2014 Research and Innovation - Impact into Cancer. , 11.03.2014, Telford, UK .


Kumar, A. and Kempken, F. (2014) Next-generation genome and transcriptome based methods for the exploration of secondary metabolites from marine fungi for the treatment of cancer. [Poster] In: ELRIG 2014 Research and Innovation - Impact into Cancer. , 11.03.2014, Telford, UK .

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Kumar, A. and Kempken, F. (2013) Genome sequencing, assembly and annotation of three marine fungal isolates using different next generation DNA sequencing methods for pharmaceutically important secondary metabolites. [Poster] In: 27. Fungal Genetics Conference. , 12.-17.03.2013, Pacific Grove, California, USA .

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Kumar, A. and Kempken, F. (2013) Genome sequencing, assembly and annotation of a marine fungal isolate of Calcarisporium using different next generation sequencing technologies. [Poster] In: 27. Fungal Genetics Conference. , 12.-17.03.2013, Pacific Grove, California, USA .

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Kumar, A. and Kempken, F. (2013) Genome sequencing, assembly and annotation of a marine fungal isolate of Scopulariopsis brevicaulis using three different next generation sequencing technologies. [Poster] In: 27. Fungal Genetics Conference. , 12.-17.03.2013, Pacific Grove, California, USA .

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Kumar, A. and Kempken, F. (2013) Genome sequencing, assembly and annotation of a marine fungal isolate of Pestalotiopsis using next generation sequencing technologies. [Poster] In: 27. Fungal Genetics Conference. , 12.-17.03.2013, Pacific Grove, California, USA .


Kumar, A. (2012) Next-generation genome sequencing, assembly, annotation and analysis of a marine isolate of Scopulariopsis brevicaulis. [Poster] In: Jahrestagung der Vereinigung für Allgemeine und Angewandte Mikrobiologie. , 18.-21.03.2012, Tübingen, Germany .


Kumar, A. (2012) The draft genome of marine isolate of Scopulariopsis brevicaulis using three different next generation sequencing methods. [Poster] In: Blue Biotech Cooperation Event. , 09.-10.05.2012, Kiel, Germany .


Kumar, A. (2012) Genome sequence analysis of three marine fungal isolates using different next generation DNA sequencing methods. [Poster] In: GCB2012 Conference. , 21.09.2012, Jena, Germany .

This list was generated on Fri Mar 22 20:09:40 2019 CET.