OceanRep
Items where Author is "Schoening, Timm (Schöning, Timm)"
Number of items: 54.
Articles in a Scientific Journal - peer-reviewed
Durden, J. M., Schoening, T. , Curtis, E. J., Downie, A., Gates, A. R., Jones, D. O. B., Kokkinaki, A., Simon-Lledó, E., Wright, D. and Bett, B. J.
(2024)
Defining the target population to make marine image-based biological data FAIR.
Ecological Informatics, 80
.
Art.Nr. 102526.
DOI 10.1016/j.ecoinf.2024.102526.
Zinzindohoue, C. G. F., Schoening, T. , Lima, E. B. and Fiedler, B.
(2023)
PlasPi TDM: Augmentation of a low-cost camera platform for advanced underwater physical-ecological observations.
HardwareX, 15
.
Art.Nr. e00470.
DOI 10.1016/j.ohx.2023.e00470.
Schoening, T. , Durden, J. M., Faber, C. , Felden, J., Heger, K., Hoving, H. J. T. , Kiko, R. , Köser, K., Krämmer, C., Kwasnitschka, T. , Möller, K. O., Nakath, D., Naß, A., Nattkemper, T. W., Purser, A. and Zurowietz, M.
(2022)
Making marine image data FAIR.
Scientific Data, 9
.
Art.Nr. 414.
DOI 10.1038/s41597-022-01491-3.
Mbani, B., Schoening, T. , Gazis, I. Z., Koch, R. and Greinert, J.
(2022)
Implementation of an automated workflow for image-based seafloor classification with examples from manganese-nodule covered seabed areas in the Central Pacific Ocean.
Scientific Reports, 12
.
Art.Nr. 15338 (2022).
DOI 10.1038/s41598-022-19070-2.
Haalboom, S., Schoening, T. , Urban, P., Gazis, I. Z., de Stigter, H., Gillard, B., Baeye, M., Hollstein, M., Purkiani, K., Reichart, G. J., Thomsen, L., Haeckel, M. , Vink, A. and Greinert, J.
(2022)
Monitoring of Anthropogenic Sediment Plumes in the Clarion-Clipperton Zone, NE Equatorial Pacific Ocean.
Frontiers in Marine Science, 9
.
Art.Nr. 882155.
DOI 10.3389/fmars.2022.882155.
Alevizos, E., Huvenne, V. A. I., Schoening, T. , Simon-Lledó, E., Robert, K. and Jones, D. O. B.
(2022)
Linkages between sediment thickness, geomorphology and Mn nodule occurrence: New evidence from AUV geophysical mapping in the Clarion-Clipperton Zone.
Deep Sea Research Part I: Oceanographic Research Papers, 179
.
Art.Nr. 103645.
DOI 10.1016/j.dsr.2021.103645.
Schoening, T. , Bodur, Y. and Köser, K.
(Submitted)
Automated Image Analysis to Map the Extent of Deep-Sea Mining Plumes Reveals a Larger Impacted Area Compared to Manual Analysis.
Scientific Reports
.
DOI 10.21203/rs.3.rs-1173923/v1.
Jones, D. O. B., Simon-Lledó, E., Amon, D. J., Bett, B. J., Caulle, C., Clément, L., Connelly, D. P., Dahlgren, T. G., Durden, J. M., Drazen, J. C., Felden, J., Gates, A. R., Georgieva, M. N., Glover, A. G., Gooday, A. J., Hollingsworth, A. L., Horton, T., James, R. H., Jeffreys, R. M., Laguionie-Marchais, C., Leitner, A. B., Lichtschlag, A., Menendez, A., Paterson, G. L. J., Peel, K., Robert, K., Schoening, T. , Shulga, N. A., Smith, C. R., Taboada, S., Thurnherr, A. M., Wiklund, H., Young, C. R. and Huvenne, V. A. I.
(2021)
Environment, ecology, and potential effectiveness of an area protected from deep-sea mining (Clarion Clipperton Zone, abyssal Pacific).
Progress in Oceanography, 197
.
Art.Nr. 102653.
DOI 10.1016/j.pocean.2021.102653.
Liu, H., Büscher, J., Köser, K., Greinert, J. , Song, H., Chen, Y. and Schoening, T.
(2021)
Automated Activity Estimation of the Cold-Water Coral Lophelia pertusa by Multispectral Imaging and Computational Pixel Classification.
Journal of Atmospheric and Oceanic Technology, 38
(2).
pp. 141-154.
DOI 10.1175/JTECH-D-19-0139.1.
Schoening, T. , Purser, A., Langenkämper, D., Suck, I., Taylor, J., Cuvelier, D. , Lins, L. , Simon-Lledó, E., Marcon, Y. , Jones, D. O. B. , Nattkemper, T., Köser, K., Zurowietz, M., Greinert, J. and Gomes-Pereira, J.
(2020)
Megafauna community assessment of polymetallic nodule fields with cameras: Platform and methodology comparison .
Biogeosciences (BG), 17
.
pp. 3115-3133.
DOI 10.5194/bg-17-3115-2020.
Gausepohl, F., Hennke, A., Schoening, T. , Köser, K. and Greinert, J.
(2020)
Scars in the abyss: reconstructing sequence, location and temporal change of the 78 plough tracks of the 1989 DISCOL deep-sea disturbance experiment in the Peru Basin .
Biogeosciences (BG), 17
.
pp. 1463-1493.
DOI 10.5194/bg-17-1463-2020.
Schoening, T.
(2019)
SHiPCC - A Sea-going High-Performance Compute Cluster for Image Analysis.
Frontiers in Marine Science, 6
(736).
DOI 10.3389/fmars.2019.00736.
Simon‐Lledo, E. , Bett, B. J., Huvenne, V. A. I., Schoening, T. , Benoist, N. M. A. and Jones, D. O. B.
(2019)
Ecology of a polymetallic nodule occurrence gradient: Implications for deep‐sea mining.
Limnology and Oceanography, 64
(5).
pp. 1883-1894.
DOI 10.1002/lno.11157.
Simon-Lledo, E. , Bett, B. J., Huvenne, V. A. I. , Köser, K., Schoening, T. , Greinert, J. and Jones, D. O. B.
(2019)
Biological effects 26 years after simulated deep-sea mining.
Scientific Reports, 9
(Article 8040).
DOI 10.1038/s41598-019-44492-w.
Simon-Lledo, E., Bett, B. J., Huvenne, V. A. I., Schoening, T. , Benoist, N. M. A., Jeffreys, R. M., Durden, J. M. and Jones, D. O. B.
(2019)
Megafaunal variation in the abyssal landscape of the Clarion Clipperton Zone.
Progress in Oceanography, 170
.
pp. 119-133.
DOI 10.1016/j.pocean.2018.11.003.
Gazis, I. Z., Schoening, T. , Alevizos, E. and Greinert, J.
(2018)
Quantitative mapping and predictive modeling of Mn nodules' distribution from hydroacoustic and optical AUV data linked by random forests machine learning.
Biogeosciences (BG), 15
(23).
pp. 7347-7377.
DOI 10.5194/bg-15-7347-2018.
Schoening, T. , Köser, K. and Greinert, J.
(2018)
An acquisition, curation and management workflow for sustainable, terabyte-scale marine image analysis.
Scientific Data, 5
(180181).
DOI 10.1038/sdata.2018.181.
Peukert, A., Schoening, T. , Alevizos, E. , Köser, K., Kwasnitschka, T. and Greinert, J.
(2018)
Understanding Mn-nodule distribution and evaluation of related deep-sea mining impacts using AUV-based hydroacoustic and optical data .
Biogeosciences (BG), 15
(8).
pp. 2525-2549.
DOI 10.5194/bg-15-2525-2018.
Liu, H., Sticklus, J. , Köser, K., Hoving, H. J. T. , Song, H., Chen, Y., Greinert, J. and Schoening, T.
(2018)
TuLUMIS - a tunable LED-based underwater multispectral imaging system.
Optics Express, 26
(6).
pp. 7811-7828.
DOI 10.1364/OE.26.007811.
Schoening, T. , Jones, D. and Greinert, J.
(2017)
Compact-Morphology-based poly-metallic Nodule Delineation.
Scientific Reports, 7
(13338 ).
DOI 10.1038/s41598-017-13335-x.
Durden, J. M., Schoening, T. , Althaus, F., Friedman, A., Garcia, R., Glover, A. G., Greinert, J. , Stout, N. J., Jones, D. O. B., Jordt, A., Kaeli, J., Köser, K., Kuhnz, L. A., Lindsay, D., Morris, K. J., Nattkemper, T. W., Osterloff, J., Ruhl, H. A., Singh, H., Tran, M. and Bett, B. J.
(2016)
Perspectives in visual imaging for marine biology and ecology: from acquisition to understanding.
Oceanography and Marine Biology: An Annual Review, 54
.
pp. 1-72.
DOI 10.1201/9781315368597.
Gomes-Pereira, J. N., Auger, V., Beisiegel, K., Benjamin, R., Bergmann, M., Bowden, D., Buhl-Mortensen, P., De Leo, F. C., Dionísio, G., Durden, J. M., Edwards, L., Friedman, A., Greinert, J. , Jacobsen-Stout, N., Lerner, S., Leslie, M., Nattkemper, T. W., Sameoto, J. A., Schoening, T. , Schouten, R., Seager, J., Singh, H., Soubigou, O., Tojeira, I., van den Beld, I., Dias, F., Tempera, F. and Santos, R. S.
(2016)
Current and future trends in marine image annotation software.
Progress in Oceanography, 149
.
pp. 106-120.
DOI 10.1016/j.pocean.2016.07.005.
Durden, J. M., Bett, B. J., Schoening, T. , Morris, K. J., Nattkemper, T. W. and Ruhl, H.
(2016)
Comparison of image annotation data generated by multiple investigators for benthic ecology.
Marine Ecology Progress Series, 552
.
pp. 61-70.
DOI 10.3354/meps11775.
Schoening, T. , Kuhn, T., Jones, D. O., Simon-Lledo, E. and Nattkemper, T. W.
(2016)
Fully automated image segmentation for benthic resource assessment of poly-metallic nodules.
Methods in Oceanography, 15-16
.
pp. 78-89.
DOI 10.1016/j.mio.2016.04.002.
Schoening, T. , Osterloff, J. and Nattkemper, T. W.
(2016)
RecoMIA - Recommendations for Marine Image Annotation: Lessons Learned and Future Directions.
Frontiers in Marine Science, 3
(59).
DOI 10.3389/fmars.2016.00059.
Kwasnitschka, T., Köser, K., Sticklus, J. , Rothenbeck, M., Weiß, T., Wenzlaff, E., Schoening, T. , Triebe, L., Steinführer, A., Devey, C. and Greinert, J.
(2016)
DeepSurveyCam — A Deep Ocean Optical Mapping System.
Sensors, 16
(164).
DOI 10.3390/s16020164.
Schoening, T. , Kuhn, T., Bergmann, M. and Nattkemper, T. W.
(2015)
DELPHI - fast and adaptive computational laser point detection and visual footprint quantification for arbitrary underwater image collections.
Frontiers in Marine Science, 2
.
DOI 10.3389/fmars.2015.00020.
Purser, A., Ontrup, J., Schoening, T. , Thomsen, L., Tong, R., Unnithan, V. and Nattkemper, T. W.
(2013)
Microhabitat and shrimp abundance within a Norwegian cold-water coral ecosystem.
Biogeosciences (BG), 10
(9).
pp. 5779-5791.
DOI 10.5194/bg-10-5779-2013.
Slomp, C. P., Schoening, T. , Bergmann, M., Ontrup, J., Taylor, J., Dannheim, J., Gutt, J., Purser, A. and Nattkemper, T. W.
(2012)
Semi-Automated Image Analysis for the Assessment of Megafaunal Densities at the Arctic Deep-Sea Observatory HAUSGARTEN.
PLoS ONE, 7
(6).
e38179.
DOI 10.1371/journal.pone.0038179.
Articles in a Scientific Journal - without review
Borremans, C., Durden, J., Schoening, T. , Curtis, E., Adams, L., Branzan Albu, A., Arnaubec, A., Ayata, S. D., Baburaj, R., Bassin, C., Beck, M., Bigham, K., Boschen-Rose, R., Collett, C., Contini, M., Correa, P., Dominguez-Carrió, C., Dreyfus, G., Duncan, G., Ferrera, M., Foulon, V., Friedman, A., Gaikwad, S., Game, C., Gaytán-Caballero, A., Girard, F., Giusti, M., Hanafi-Portier, M., Howell, K., Hulevata, I., Itiowe, K., Jackett, C., Jansen, J., Karthäuser, C., Katija, K., Kernec, M., Kim, G., Kitahara, M., Langenkämper, D., Langlois, T., Lanteri, N., Jianping Li, C., Li, Q. R., Liabot, P. O., Lindsay, D., Loulidi, A., Marcon, Y., Marini, S., Marranzino, A., Massot-Campos, M., Matabos, M., Menot, L., Moreno, B., Morrissey, M., Nakath, D., Nattkemper, T., Neufeld, M., Obst, M., Olu, K., Parimbelli, A., Pasotti, F., Pelletier, D., Perhirin, M., Piechaud, N., Pizarro, O., Purser, A., Rodrigues, C., Ceballos Romero, E., Schlining, B., Song, Y., Sosik, H., Sourisseau, M., Taormina, B., Taucher, J. , Thornton, B., Van Audenhaege, L., von der Meden, C., Wacquet, G., Williams, J., Witting, K. and Zurowietz, M.
(2024)
Report on the Marine Imaging Workshop 2022.
Research Ideas and Outcomes (RIO), 10
.
Art.Nr. e119782.
DOI 10.3897/rio.10.e119782.
Alevizos, E. , Schoening, T. , Köser, K., Snellen, M. and Greinert, J.
(2018)
Quantification of the fine-scale distribution of Mn-nodules: insights from AUV multi-beam and optical imagery data fusion.
Biogeosciences Discussions
.
DOI 10.5194/bg-2018-60.
Schoening, T. , Durden, J., Preuss, I., Branzan Albu, A., Purser, A., De Smet, B., Dominguez-Carrió, C., Yesson, C., de Jonge, D., Lindsay, D., Schulz, J., Möller, K. O., Beisiegel, K., Kuhnz, L., Hoeberechts, M., Piechaud, N., Sharuga, S. and Treibitz, T.
(2017)
Report on the Marine Imaging Workshop 2017.
Research Ideas and Outcomes, 3
(e13820).
DOI 10.3897/rio.3.e13820.
Conference papers
Schoening, T. , Kuhn, T. and Nattkemper, T. W.
(2014)
Seabed Classification Using a Bag-of-Prototypes Feature Representation.
[Paper]
In: International Conference on Pattern Recognition. , 24.08.2014 , Stockholm, Sweden . 2014 ICPR Workshop on Computer Vision for Analysis of Underwater Imagery. ; pp. 17-24 .
DOI 10.1109/CVAUI.2014.9.
Schoening, T. , Bergmann, M. and Nattkemper, T. W.
(2012)
Investigation of hidden parameters influencing the automated object detection in images from the deep seafloor of the HAUSGARTEN observatory.
[Paper]
In: OCEANS 2012. , 14.-19.10.2012 , Hampton Roads, VA, USA . 2012 Oceans. ; pp. 1-5 .
DOI 10.1109/OCEANS.2012.6405040.
Schoening, T. , Hans, V. H. and Nattkemper, T. W.
(2011)
Towards Improved Epilepsia Diagnosis by Unsupervised Segmentation of Neuropathology Tissue Sections using Ripley’s-L features.
[Paper]
In: Bildverarbeitung für die Medizin. , 20.-22.03.2011, Lübeck, Germany . Bildverarbeitung für die Medizin 2011. ; pp. 44-48 .
DOI 10.1007/978-3-642-19335-4_11.
Schoening, T. , Ehnert, N., Ontrup, J. and Nattkemper, T. W.
(2009)
BIIGLE Tools - A Web 2.0 Approach for Visual Bioimage Database Mining.
[Paper]
In: 13. International Conference on Information Visualization. , 15.-17.07.2009, Barcelona, Spain ; pp. 51-56 .
DOI 10.1109/iv.2009.71.
Presentations
Schroller-Lomnitz, U. and Schoening, T.
(2021)
“Elements” MAMS.
[Talk]
In: GFZ DataHub Introduction. , 29.10.2021, Virtual .
Reports - Cruise Reports
Schoening, T. and Paul, S.
(2021)
Metal geochemistry meets machine learning: Assessing sedimentary and pore-water rare earth element variability from local to basin scale across the NE Atlantic Ocean, 10.10.2020 – 10.11.2020, Emden (Germany) – Emden (Germany) Metal-ML.
.
Maria S. Merian-Berichte, MSM96
.
Gutachterpanel Forschungsschiffe, 77 pp.
DOI 10.48433/cr_msm96.
Fiedler, B., Hoving, H. J. , Schütte, F., Czudaj, S., Genio, L., Cunha, M., Meckel, S., Waldmann, C., Fock, H., Silva, P., Vieira, N., Karstensen, J. , Krahmann, G. , Liu, H., Schoening, T. and Flögel, S.
(2020)
Intra-annual variability of biological, chemical and physical parameters at the Senghor seamount Cruise No. MSM61
18.02.2017 – 27.02.2017,
Mindelo (Cabo Verde) – Las Palmas (Spain).
.
Maria S. Merian-Berichte, MSM61
.
Gutachterpanel Forschungsschiffe, Bonn, Germany, 30 pp.
DOI 10.48433/cr_msm61.
Greinert, J. and Schoening, T.
(2019)
RV POSEIDON Fahrtbericht / Cruise Report POS526 - SeASOM: Semi-Autonomous Subsurface Optical Monitoring for methane seepage and cold-water coral studies in the North Sea, Bergen (Norway) – Doggerbank (Netherlands) – Hirtshals (Denmark) – Tisler (Norway) – Kiel (Germany), 23.07. – 11.08.2018
.
.
GEOMAR Report, N. Ser. 051
.
GEOMAR Helmholtz-Zentrum für Ozeanforschung, Kiel, Germany, 86 pp.
DOI 10.3289/geomar_rep_ns_51_2019.
Reports - Weekly reports
Schöning, T.
(2020)
5. Wochenbericht MSM96.
.
GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, 2 pp.
Schöning, T.
(2020)
4. Wochenbericht MSM96.
.
GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, 2 pp.
Schöning, T.
(2020)
3. Wochenbericht MSM96.
.
GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, 2 pp.
Schöning, T.
(2020)
2. Wochenbericht MSM96.
.
GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, 2 pp.
Schöning, T.
(2020)
1. Wochenbericht MSM96.
.
GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, 2 pp.
Reports - other reports
Schulz, J., Möller, K. O., Bracher, A., Hieronymi, M. , Cisewski, B., Zielinski, O., Voss, D., Gutzeit, E., Dolereit, T., Niedzwiedz, G., Kohlberg, G., Schories, D., Kiko, R. , Körtzinger, A. , Falldorf, C., Fischer, P., Nowald, N., Beisiegel, K., Martinez-Arbizu, P., Rüssmeier, N., Röttgers, R., Büdenbender, J., Jordt-Sedlazeck, A., Koch, R., Riebesell, U. , Hvitfeldt Iversen, M., Köser, K., Kwasnitschka, T., Wellhausen, J., Barz, K., Rohde, S., Nattkemper, T. W., Schoening, T. , Peeters, F., Hofmann, H., Busch, J. A., Hirche, H. J., Niehoff, B., Hildebrandt, N., Stohr, E., Winter, C., Herbst, G., Konrad, C., Schmidt, M. , Linke, P. , Brey, T., Bange, H. W. , Nolle, L., Krägefsky, S., Gröger, J., Sauter, E., Schulz, M., Müller, J., Rehder, G., Stepputtis, D. and Beszteri, B.
(2015)
Aquatische Optische Technologien in Deutschland.
.
Meereswissenschaftliche Berichte, 97
.
IOW, Warnemünde, Germany, 92 pp.
DOI 10.12754/msr-2015-0097.
Reports - Data reports
Software
Mbani, B. , Schoening, T. and Greinert, J.
(2023)
Automated and Integrated Seafloor Classification Workflow (AI-SCW).
DOI 10.3289/SW_2_2023.
Schoening, T.
(2017)
Source code for the Compact Morphology-based Nodule Delineation (CoMoNoD) algorithm.
Images
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