Items where Author is "Perner, Mirjam"

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Number of items: 81.

2023

[thumbnail of s40643-023-00705-9.pdf]

Bährle, R. J., Böhnke, S., Engelhard, J., Bachmann, J. and Perner, M. (2023) Current status of carbon monoxide dehydrogenases (CODH) and their potential for electrochemical applications. Open Access Bioresources and Bioprocessing, 10 . Art.Nr. 84 (2023). DOI 10.1186/s40643-023-00705-9.

[thumbnail of fclim-05-1245580.pdf] [thumbnail of Data Sheet 1.docx]

Fuhr, M., Wallmann, K. , Dale, A. W. , Diercks, I., Kalapurakkal, H. T., Schmidt, M. , Sommer, S., Böhnke, S., Perner, M. and Geilert, S. (2023) Disentangling artificial and natural benthic weathering in organic rich Baltic Sea sediments. Open Access Frontiers in Climate, 5 . Art.Nr. 1245580. DOI 10.3389/fclim.2023.1245580.

Adam-Beyer, N., Laufer-Meiser, K., Fuchs, S. , Schippers, A., Indenbirken, D., Garbe-Schönberg, D., Petersen, S. and Perner, M. (2023) Microbial ecosystem assessment and hydrogen oxidation potential of newly discovered vent systems from the Central and South-East Indian Ridge. Open Access Frontiers in Microbiology, 14 . Art.Nr. 1173613. DOI 10.3389/fmicb.2023.1173613.


Adam-Beyer, N., Scholz, F. and Perner, M. (2023) Benthic microbial communities exposed to seasonal hypoxia in the Baltic Sea. [Talk] In: FEMS2023. , 09.-13.07.2023, Hamburg, Germany .


Adam-Beyer, N. and Perner, M. (2023) Activity-Based Screening of Metagenomic Fosmid Libraries for Hydrogen-Uptake Enzymes. In: Metagenomics, Methods and Protocols. , ed. by Streit, W. R. and Daniel, R.. Methods in Molecular Biology, 2555 . Springer, Cham, pp. 91-101, 11 pp. 3rd edition DOI 10.1007/978-1-0716-2795-2_6.

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Adam-Beyer, N. and Perner, M. (2023) Assessing microbial hydrogen oxidation in seafloor habitats. [Poster] In: FEMS2023. , 09.-13.07.2023, Hamburg, Germany .

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Adam-Beyer, N. and Perner, M. (2023) Uncovering the hydrogen utilization potential of the microbial dark matter in seafloor habitats. [Poster] In: Goldschmidt Conference 2023. , 9.-14.07.2023, Lyon, France .


Bährle, R. J., Böhnke-Brandt, S. and Perner, M. (2023) How to develop a functional-based screen for seeking novel CODH enzymes from uncultured microbes. [Poster] In: FEMS2023. , 09.-13.07.2023, Hamburg, Germany .


Bährle, R. J., Böhnke-Brandt, S. and Perner, M. (2023) Seeking novel environmental CODHs using functional metagenomic screening. [Talk] In: FEMS2023. , 09.-13.07.2023, Hamburg, Germany .


Bährle, R. J., Böhnke-Brandt, S. and Perner, M. (2023) Catch me if you can Function-based screening for novel CODH enzymes from hydrothermal vent environments and marine sediments. [Talk] In: VAAM-Jahrestagung 2023. , 10.-13.09.2023, Göttingen .


Böhnke, S., Zarzycki, J., Bährle, R. J., Enderle, M., Paczia, N., Engelhard, J., Bachmann, J., Erb, J. and Perner, M. (2023) Tapping into the unknown: Functional screening for CO2 reducing enzymes gives unprecedented insights into the uncultured microbial majority. [Talk] In: Goldschmidt Conference 2023. , 9.-14.07.2023, Lyon, France .


Böhnke, S., Zarzycki, J., Scheffen, M., Paczia, N., Erb, J. and Perner, M. (2023) Access to the uncultured microbial life: A functional metagenomic RubisCO screen reveals a novel ribulose-1,5-bisphosphate converting enzyme. [Poster] In: VAAM Jahrestagung 2023. , 10.-13.09.2023, Göttingen, Germany .

[thumbnail of AL595_CruiseReport.pdf]

Hölz, S. , Perner, M. , Adam-Beyer, N., Schmitz, W., Türk, M., Wenzel-Storjohann, A. , Leibold, P., Diller, N., Jäkle, A., Kurbjuhn, T. and Scheppukat, D. (2023) Bathymetric and microbial investigations at the Grimsey Vent Field (Iceland), Cruise No. AL595, 31.5. – 20.6.2023, Kiel (Germany) – Grimsey Vent Field (Iceland) – Kiel (Germany) AUV@GVF. Open Access . Alkor-Berichte, AL595 . GEOMAR Helmholtz Centre for Ocean Research, Kiel, Germany, 70 pp. DOI 10.3289/CR_AL595.


Perner, M. (2023) Activity-based Screens Developed to Target Novel Enzymes from Marine Resources. [Invited talk] In: Gordon Research Conference Molecular Basis of Microbial One-Carbon Metabolism. , 2023, Boston, USA .

2022

[thumbnail of fmicb-13-1096062.pdf] [thumbnail of Data Sheet 1.docx]

Perner, M. , Wallmann, K. , Adam-Beyer, N., Hepach, H. , Laufer-Meiser, K., Böhnke, S., Diercks, I., Bange, H. W. , Indenbirken, D., Nikeleit, V., Bryce, C., Kappler, A., Engel, A. and Scholz, F. (2022) Environmental changes affect the microbial release of hydrogen sulfide and methane from sediments at Boknis Eck (SW Baltic Sea). Open Access Frontiers in Microbiology, 13 . Art.Nr. 1096062. DOI 10.3389/fmicb.2022.1096062.

Hansen, C. T., Kleint, C., Böhnke, S., Klose, L., Adam-Beyer, N., Sass, K., Zitoun, R., Sander, S. G., Indenbirken, D., Dittmar, T., Koschinsky, A. and Perner, M. (2022) Impact of high Fe-concentrations on microbial community structure and dissolved organics in hydrothermal plumes: an experimental study. Open Access Scientific Reports, 12 . Art.Nr. 20723 (2022). DOI 10.1038/s41598-022-25320-0.


Bährle, R. J., Böhnke-Brandt, S., Englhard, J., Bachmann, J. and Perner, M. (2022) Identification of novel environmental CODH enzymes using functional-based screening. [Poster] In: HGF TOPIC 6 Symposium. , 21.06.2022, Kiel, Germany .


Bährle, R. J., Böhnke-Brandt, S. and Perner, M. (2022) Functional metagenomics as a tool to identify novel CODH enzymes. [Talk] In: VAAM Jahrestagung 2022. , 20.-22.02.2022, virtuell .


Bährle, R. J., Böhnke-Brandt, S. and Perner, M. (2022) From environnmental CODH enzymes to industrial application - Development of an activtiy-based screen to identify novel CODHs. [Talk] In: YOUMARES 13. , 11. -14.10.2022, Berlin .


Böhnke, S., Adam-Beyer, N., Bährle, R. J. and Perner, M. (2022) Diving into the ocean’s microbial dark matter: from sensor triggered sampling and activity-based enzyme searches. [Poster] In: GRC Marine Microbes 2022. , 29.05.-03.06.2022, Les Disablerets, Switzerland .


Böhnke, S., Hansen, C., Kleint, C., Klose, L., Adam-Beyer, N., Sass, K., Dittmar, T., Koschinsky, A. and Perner, M. (2022) Iron amendment to hydrothermal plumes induces shifts in microbial communities and provide first insights into the microbial organic iron-ligand production. [Poster] In: VAAM Jahrestagung 2022. , 20.-22.02.2022, virtuell .


Böhnke, S. and Perner, M. (2022) Glimpses into microbial dark matter proteins uncover novel ribulose-1,5-bisphosphate converting enzyme. [Invited talk] In: GRS One Carbon Metabolism. , 2022, Boston, USA .

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Perner, M. , Laufer-Meiser, K., Adam-Beyer, N. and Schippers, A. (2022) Iron oxidation by Hydrogenovibrio isolated from deep sea hydrothermal vents. Open Access [Talk] In: Goldschmidt Conference 2022. , 10.07.-15.07.2022, Honolulu, Hawaii, USA . DOI 10.46427/gold2022.13183.

2021

[thumbnail of fmicb-12-686276.pdf] [thumbnail of Data_Sheet_1_Deltaproteobacterium Strain KaireiS1, a Mesophilic, Hydrogen-Oxidizing and Sulfate-Reducing Bacterium From an Inactive Deep-Sea Hydrother.PDF]

Adam, N., Han, Y., Laufer-Meiser, K., Bährle, R. J., Schwarz-Schampera, U., Schippers, A. and Perner, M. (2021) Deltaproteobacterium Strain KaireiS1, a Mesophilic, Hydrogen-Oxidizing and Sulfate-Reducing Bacterium From an Inactive Deep-Sea Hydrothermal Chimney. Open Access Frontiers in Microbiology, 12 . Art.Nr. 686276. DOI 10.3389/fmicb.2021.686276.

2020

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Sass, K., Güllert, S., Streit, W. R. and Perner, M. (2020) A hydrogen‐oxidizing bacterium enriched from the open ocean resembling a symbiont. Open Access Environmental Microbiology Reports, 12 (4). pp. 396-405. DOI 10.1111/1758-2229.12847.

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Adam, N., Schlicht, S., Han, Y., Bechelany, M., Bachmann, J. and Perner, M. (2020) Metagenomics meets Electrochemistry: utilizing the huge catalytic potential from the uncultured microbial majority for energy-storage. Open Access Frontiers in Bioengineering and Biotechnology, 8 (567). DOI 10.3389/fbioe.2020.00567.

Adam, N., Kriete, C., Garbe-Schönberg, D., Gonnella, G., Krause, S., Schippers, A., Kurtz, S., Schwarz-Schampera, U., Han, Y., Indenbirken, D. and Perner, M. (2020) Microbial Community Compositions and Geochemistry of Sediments with Increasing Distance to the Hydrothermal Vent Outlet in the Kairei Field. Open Access Geomicrobiology Journal, 37 (3). pp. 242-254. DOI 10.1080/01490451.2019.1694107.

2019

[thumbnail of fmicb-10-02296.pdf] [thumbnail of Data_Sheet_1_Parameters Governing the Community Structure and Element Turnover in Kermadec Volcanic Ash and Hydrothermal Fluids as Monitored by Inorga.pdf]

Böhnke, S., Sass, K., Gonnella, G., Diehl, A., Kleint, C., Bach, W., Zitoun, R., Koschinsky, A., Indenbirken, D., Sander, S. G., Kurtz, S. and Perner, M. (2019) Parameters Governing the Community Structure and Element Turnover in Kermadec Volcanic Ash and Hydrothermal Fluids as Monitored by Inorganic Electron Donor Consumption, Autotrophic CO2 Fixation and 16S Tags of the Transcriptome in Incubation Experiments. Open Access Frontiers in Microbiology, 10 (2296). DOI 10.3389/fmicb.2019.02296.

[thumbnail of US20190241881A1.pdf] [thumbnail of WO2018017792A1.pdf]

Salmon, S., Borchert, M. S., Blicher, T. H., Streit, W. and Perner, M. Antragsteller/Inhaber: Novozymes A/S, Bagsvaerd (DK) (2019) Heat-stable metagenomic carbonic andydrases and their use. Open Access US 2019 / 0241881 A1 ( Patent ) Final grant of patent

2018

[thumbnail of fmicb-09-02873.pdf]

Adam, N. and Perner, M. (2018) Microbially Mediated Hydrogen Cycling in Deep-Sea Hydrothermal Vents. Open Access Frontiers in Microbiology, 9 (2873). DOI 10.3389/fmicb.2018.02873.

Han, Y., Gonnella, G., Adam, N., Schippers, A., Burkhardt, L., Kurtz, S., Schwarz-Schampera, U., Franke, H. and Perner, M. (2018) Hydrothermal chimneys host habitat-specific microbial communities: analogues for studying the possible impact of mining seafloor massive sulfide deposits. Open Access Scientific Reports, 8 (1). p. 10386. DOI 10.1038/s41598-018-28613-5.

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Fredslund, F., Borchert, M. S., Poulsen, J. C. N., Mortensen, S. B., Perner, M. , Streit, W. R. and Lo Leggio, L. (2018) Structure of a hyperthermostable carbonic anhydrase identified from an active hydrothermal vent chimney. Enzyme and Microbial Technology, 114 . pp. 48-54. DOI 10.1016/j.enzmictec.2018.03.009.


Böhnke, S. and Perner, M. (2018) An activity-based metagenomic screen reveals: RubisCO is not the only enzyme that converts ribulose-1,5-bisposphate. [Talk] In: ISME17 - 17. International Symposium on Microbial Ecology. , 12.-17.08.2018, Leipzig, Germany .


Böhnke, S. and Perner, M. (2018) Metagenomic and mutagenesis studies uncover novel features for regulating RubisCO expression in an uncultured deep-sea vent bacterium. [Poster] In: VAAM Jahrestagung 2018. , 2018, Wolfsburg, Germany .


Sass, K., Böhnke-Brandt, S. and Perner, M. (2018) Iron, sulfide and hydrogen cycling in Kermadec Arc hydrothermal fluids: microbial turnover rates coupled to transcriptomics give insight into biogeochemical processes. [Talk] In: Goldschmidt Conference 2018. , 12.08.-17.08.2018, Boston, USA .

2017

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Adam, N. and Perner, M. (2017) Activity-Based Screening of Metagenomic Libraries for Hydrogenase Enzymes. In: Metagenomics: Methods and Protocols. , ed. by Streit, W. R. and Daniel, R.. Springer, New York, NY, pp. 261-270. ISBN 978-1-4939-6689-9 DOI 10.1007/978-1-4939-6691-2_17.

2016

[thumbnail of Gonnella.pdf] [thumbnail of Gonnella_Suppl.pdf]

Gonnella, G., Böhnke, S., Indenbirken, D., Garbe-Schönberg, D., Seifert, R., Mertens, C., Kurtz, S. and Perner, M. (2016) Endemic hydrothermal vent species identified in the open ocean seed bank. Nature Microbiology, 1 (8). Article number: 16086. DOI 10.1038/nmicrobiol.2016.86.

[thumbnail of c6ta00392c.pdf] [thumbnail of c6ta00392c1.pdf]

Schlicht, S., Assaud, L., Hansen, M., Licklederer, M., Bechelany, M., Perner, M. and Bachmann, J. (2016) An electrochemically functional layer of hydrogenase extract on an electrode of large and tunable specific surface area. Open Access Journal of Materials Chemistry A, 4 (17). pp. 6487-6494. DOI 10.1039/C6TA00392C.

2015


Gebert, J. and Perner, M. (2015) Impact of preferential methane flow through soil on microbial community composition. European Journal of Soil Biology, 69 . pp. 8-16. DOI 10.1016/j.ejsobi.2015.03.006.

[thumbnail of Hansen_Perner.pdf]

Hansen, M. and Perner, M. (2015) A novel hydrogen oxidizer amidst the sulfur-oxidizing Thiomicrospira lineage. The ISME Journal, 9 (3). pp. 696-707. DOI 10.1038/ismej.2014.173.

2014

[thumbnail of Appl. Environ. Microbiol.-2014-Perner-4585-98.pdf] [thumbnail of see "Details"]

Perner, M. , Gonnella, G., Kurtz, S. and LaRoche, J. (2014) Handling Temperature Bursts Reaching 464 C: Different Microbial Strategies in the Sisters Peak Hydrothermal Chimney. Applied and Environmental Microbiology, 80 (15). pp. 4585-4598. DOI 10.1128/AEM.01460-14.

2013

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Perner, M. , Gonella, G., Hourdez, S., Böhnke, S., Kurtz, S. and Girguis, P. (2013) In situ chemistry and microbial community compositions in five deep-sea hydrothermal fluid samples from Irina II in the Logatchev field. Environmental Microbiology, 15 (5). pp. 1551-1560. DOI 10.1111/1462-2920.12038.

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Perner, M. , Hansen, M., Seifert, R., Strauss, H., Koschinsky, A. and Petersen, S. (2013) Linking geology, fluid chemistry, and microbial activity of basalt- and ultramafic-hosted deep-sea hydrothermal vent environments. Geobiology, 11 (4). pp. 340-355. DOI 10.1111/gbi.12039.

2012


Böhnke, S. and Perner, M. (2012) Function based screening of CO2 reducing enzymes by using metagenomic libraries from hydrothermal deep-sea systems. [Talk] In: ISME14 - 14th International Symposium on Microbial Ecology. , 19.-24.08.2012, Copenhagen, Denmark .


Böhnke, S. and Perner, M. (2012) Novel function based approaches for seeking CO2 reducing enzymes on a metagenomic scale. [Poster] In: GRC C1-Metabolism. , 2012, Boston, USA .


Klevenz, V., Sander, S. G., Perner, M. and Koschinsky, A. (2012) Amelioration of free copper by hydrothermal vent microbes as a response to high copper concentrations. Chemistry and Ecology, 28 (5). pp. 405-420. DOI 10.1080/02757540.2012.666531.

2011


Böhnke, S. and Perner, M. (2011) Autotrophic carbon fixation: Advances in biogeochemical interactions, with function based approaches on a metagenomic level as a prospect. [Talk] In: CAREX Conference on Life in Extreme Environments. , 18.-20.10.2011, Dublin, Ireland .

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Perner, M. , Hentscher, M., Rychlik, N., Seifert, R., Strauss, H. and Bach, W. (2011) Driving forces behind the biotope structures in two low-temperature hydrothermal venting sites on the southern Mid-Atlantic Ridge. Environmental Microbiology Reports, 3 (6). pp. 727-737. DOI 10.1111/j.1758-2229.2011.00291.x.


Perner, M. , Ilmberger, N., Köhler, H. U., Chow, J. and Streit, W. R. (2011) Emerging fields in functional metagenomics and its industrial relevance - overcoming limitations and redirecting the search for novel biocatalysts. In: Handbook of Molecular Microbial Ecology II: Metagenomics in Different . , ed. by de Bruijn, F. J.. Wiley, Hoboken, , pp. 483-498.

2010

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Dekov, V. M., Petersen, S. , Garbe-Schönberg, C. D., Kamenov, G. D., Perner, M. , Kuzmann, E. and Schmidt, M. (2010) Fe–Si-oxyhydroxide deposits at a slow-spreading centre with thickened oceanic crust: the Lilliput hydrothermal field (9°33′S, Mid-Atlantic Ridge). Chemical Geology, 278 . pp. 186-200. DOI 10.1016/j.chemgeo.2010.09.012.

[thumbnail of Perner.pdf]

Perner, M. , Petersen, J. M., Zielinski, F., Gennerich, H. H. and Seifert, R. (2010) Geochemical constraints on the diversity and activity of H2-oxidizing microorganisms in diffuse hydrothermal fluids from a basalt- and an ultramafic-hosted vent. FEMS Microbiology Ecology, 74 (1). pp. 55-71. DOI 10.1111/j.1574-6941.2010.00940.x.

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Perner, M. , Seifert, R., Strauss, H. and Petersen, S. (2010) Microbial communities and metabolisms from basalt- and ultramafic-hosted vents. Open Access [Talk] In: Chapman Conference on Detachments in Oceanic Lithosphere: Deformation, Magmatism, Fluid Flow, and Ecosystems, American Geophysical Union. , 11.05.2010, Agros, Cyprus .

2009


Imhoff, J. F. , Hügler, M., Perner, M. and Gärtner, A. (2009) Microbial life at deep sea hydrothermal vents - recent developments and new challenges. [Talk] In: 6. Workshop SPP 1144. , 21.09.2009, Etelsen .

[thumbnail of Perner et.al.pdf]

Perner, M. , Bach, W., Hentscher, M., Koschinsky, A., Garbe-Schönberg, D., Streit, W. R. and Strauss, H. (2009) Short-term microbial and physico-chemical variability in low-temperature hydrothermal fluids near 5°S on the Mid-Atlantic Ridge. Environmental Microbiology, 11 (10). pp. 2526-2541. DOI 10.1111/j.1462-2920.2009.01978.x.


Strauss, H., Peters, M., Farquhar, J., Eickmann, B., Garbe-Schönberg, C. D., Haase, K., Koepke, J., Koschinsky, A., Ockert, C., Oeser, M., Petersen, S. , Thomazo, C., Cherkashev, G. and Perner, M. (2009) From Mantle to Ocean: tracing the pathway of sulphur with multiple sulphur isotopes. [Talk] In: SPP1144 Annual Meeting. , 22.09.2009, Etelsen .

2008

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Petersen, S. , Augustin, N. , Borowski, C., Buller, K. C., Denker, C., Fabian, M., Fink, D., Heesemann, B., Jost, C., Koy, U., Keir, R., Kuhn, T., Marbler, H., Meier, T., Perner, M. , Peters, M., Schattenhofer, M., Vogt, M., Wefers, P., Westernstroer, U. and Westhues, A. (2008) RV Atalante Cruise Report HYDROMAR V, Toulon, France - Recife, Brazil, 04.12.2007 - 02.01.2008. Open Access . IFM-GEOMAR Report, 22 . IFM-GEOMAR, Kiel, 103 pp. DOI 10.3289/ifm-geomar_rep_22_2008.

2007

[thumbnail of Haase_et_al-2007-Geochemistry,_Geophysics,_Geosystems.pdf]

Haase, K. M., Petersen, S. , Koschinsky, A., Seifert, R., Devey, C. W. , Keir, R., Lackschewitz, K., Melchert, B., Perner, M. , Schmale, O., Süling, J., Dubilier, N., Zielinski, F. and Fretzdorff, S. (2007) Young volcanism and related hydrothermal activity at 5°S on the slow-spreading southern Mid-Atlantic Ridge. Open Access Geochemistry, Geophysics, Geosystems, 8 (Q11002). DOI 10.1029/2006GC001509.

[thumbnail of j.1574-6941.2007.00325.x.pdf]

Perner, M. , Kuever, J., Seifert, R., Pape, T., Koschinsky, A., Schmidt, K., Strauss, H. and Imhoff, J. F. (2007) The influence of ultramafic rocks on microbial communities at the Logatchev Hydrothermal field, located 15°N on the Mid-Atlantic Ridge. FEMS Microbiology Ecology, 61 . pp. 97-109. DOI 10.1111/j.1574-6941.2007.00325.x.


Perner, M. , Küver, J. and Imhoff, J. F. (2007) Bacterial genes associated with H2-oxidation and CO² fixation pathways (CBB and rTCA cycles) in hydrothermal fluids with distinct physico-chemical parameters. [Talk] In: SPP 1144 Jahrestagung 2007. , 27.06.2007, Etelsen/Bremen .

[thumbnail of Microbial_CO2.pdf]

Perner, M. , Seifert, R., Weber, S., Koschinsky, A., Schmidt, K., Strauss, H., Peters, M., Haase, K. and Imhoff, J. F. (2007) Microbial CO2 fixation and sulfur cycling associated with low-temperature emissions at the Lilliput hydrothermal field, southern Mid-Atlantic Ridge (9°S). Environmental Microbiology, 9 (5). pp. 1186-1201. DOI 10.1111/j.1462-2920.2007.01241.x.


Perner, M. , Seifert, R., Weber, S., Strauss, H., Petersen, R. M. and Imhoff, J. F. (2007) Microbial CO² fixation and sulfur cycling associated with low-temperature emissions at the Lilliput hydrothermal field, southern Mid-Atlantic Ridge (9°S). [Talk] In: VAAM-Jahrestagung 2007. , 01.-04.04.2007, Osnabrück .

2006


Perner, M. , Kuever, J., Koschinsky, A., Schmidt, K., Strauss, H., Seifert, R. and Imhoff, J. F. (2006) The role of hydrothermal fluids on microbial communities at the ultramafic-hosted Logatchev Hydrothermal Field (LHF). [Talk] In: 3. Workshop des Schwerpunktprogramms (SPP1144) "Vom Mantel zum Ozean: Energie-, Stoff- und Lebenszyklen an Spreizungsachsen". , 06.07.2006, Etelsen bei Bremen .

2005


Haase, K. M., Petersen, S. , Perner, M. , Schott, T. and Süling, J. and M64/1 Scientific Party (2005) Hydrothermal venting and volcanism on the southern Mid-Atlantic Ridge. [Talk] In: AGU Fall Meeting 2005. , 05.-09.12.2005, San Francisco, USA .


Haase, K. M., Petersen, S. , Perner, M. , Schott, T. and Süling, J. and M64/1 Scientific Party (2005) Hydrothermal activity on the southern Mid-Atlantic Ridge: first results of the M64/1 cruise. [Talk] In: 83. Jahrestagung der Deutschen Mineralogischen Gesellschaft (DMG). , 18.09.-21.09.2005, Aachen .

2003

This list was generated on Thu Mar 28 21:17:08 2024 CET.